BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D10SP1|AL425860
(825 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1697 1635 0.0
>3x_Contig1697
Length = 16220
Score = 1635 bits (825), Expect = 0.0
Identities = 825/825 (100%)
Strand = Plus / Plus
Query: 1 atcattaatgtcgcagtattgttgatagtaattatatctctcaattcagattcttcggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5991 atcattaatgtcgcagtattgttgatagtaattatatctctcaattcagattcttcggtt 6050
Query: 61 tgatcaaatggtactggaatcgaatgagacttaccaacattattgatcaaaacagttaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6051 tgatcaaatggtactggaatcgaatgagacttaccaacattattgatcaaaacagttaca 6110
Query: 121 ggtaaacccgacgcaacttctctaattaaagtatagttctccttgctatcagaactgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6111 ggtaaacccgacgcaacttctctaattaaagtatagttctccttgctatcagaactgaca 6170
Query: 181 tcaatggctaaaattttaacgtcaatcttgcattcagtctcgatttccttcttcaattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6171 tcaatggctaaaattttaacgtcaatcttgcattcagtctcgatttccttcttcaattca 6230
Query: 241 actagcttcgattcagttctactgatcaaaattaggttgaacccgcgtttcgctaattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6231 actagcttcgattcagttctactgatcaaaattaggttgaacccgcgtttcgctaattgt 6290
Query: 301 ttggcgtattctttaccaataccgtcactagcaccagtaacaacagcatatgcacctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6291 ttggcgtattctttaccaataccgtcactagcaccagtaacaacagcatatgcacctttc 6350
Query: 361 cccttaccgtacttcttaaagtctggacctggaagaacaaacaagtctaagaccatcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6351 cccttaccgtacttcttaaagtctggacctggaagaacaaacaagtctaagaccatcttg 6410
Query: 421 ctgaagtttaaggtcaaaaacaccatctttgatatacctaacccgaaaactatccatgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6411 ctgaagtttaaggtcaaaaacaccatctttgatatacctaacccgaaaactatccatgca 6470
Query: 481 gcaacatttaaggaactgcattctctcaatgctgtaacattgtatagttgatcaattaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6471 gcaacatttaaggaactgcattctctcaatgctgtaacattgtatagttgatcaattaaa 6530
Query: 541 gccaccattttgcactgatcactgatccgttaacagagtttgctacggttacctgtgaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6531 gccaccattttgcactgatcactgatccgttaacagagtttgctacggttacctgtgaca 6590
Query: 601 attattctgctctgccaatacttgcatcgcgtattactctactcttatgtcccaaacttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6591 attattctgctctgccaatacttgcatcgcgtattactctactcttatgtcccaaacttt 6650
Query: 661 caactttttatttcaatttctttaggatagaaaattggatacccgttggaacacagtaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6651 caactttttatttcaatttctttaggatagaaaattggatacccgttggaacacagtaag 6710
Query: 721 tgacaaaatggaatatatatctagctggaatggtaatgatacatggcagtactctcattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6711 tgacaaaatggaatatatatctagctggaatggtaatgatacatggcagtactctcattg 6770
Query: 781 attacatgactagtactatttatgattcgagtatatactgatgtt 825
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6771 attacatgactagtactatttatgattcgagtatatactgatgtt 6815
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6524
Number of Sequences: 1807
Number of extensions: 6524
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 825
length of database: 10,358,551
effective HSP length: 16
effective length of query: 809
effective length of database: 10,329,639
effective search space: 8356677951
effective search space used: 8356677951
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)